KalbeDigitalLab/PathologyNucleiClassification

1## Overview2Nuclei classification within Haematoxylin & Eosi stained histology images. Classifying nuclei cells as the following types:3- Other4- Inflammatory 5- Epithelial6- Spindle-Shaped7 8References: https://doi.org/10.1016/j.media.2019.1015639 10## Dataset11The model is trained with Colorectal Nuclear Segmentation and Phenotypes (CoNSeP) dataset https://warwick.ac.uk/fac/cross_fac/tia/data/hovernet. Images were extracted from 16 colorectal adenocarcinoma (CRA) WSIs.12 13- Target: Nuclei14- Task: Nuclei Cells Class Classification15- Modality: Image (RGB)16 17## Model Architecture18The model is trained using DenseNet121 over CoNSep dataset.19![alt text](file/figures/architecture.png)20 21## Demo22Please select or upload a nuclei histology image and label image to see Nuclei Cells Classification capabilities of this model