GENOMICS-CDDBRG/Phylogenetic_Tree_Builder

1"""2Woloji Genomic Suite v1.03A single Streamlit deployment that bundles five sequence analysis tools behind4one sidebar. Each tool keeps its own logic in tools/<name>.py and exposes a5render() function. This file only handles page configuration and navigation.6"""7 8import streamlit as st9 10st.set_page_config(11    page_title="Woloji Genomic Suite v1.0",12    page_icon=":dna:",13    layout="wide",14    initial_sidebar_state="expanded",15)16 17import phyloforge18import crispr_cas19import mge_plasmid20import primer_design21import geneclean_blast22 23TOOLS = {24    "PhyloForge (phylogenetic trees)": phyloforge,25    "CRISPR-Cas Detector": crispr_cas,26    "MGE / Plasmid Detector": mge_plasmid,27    "Primer Design Tool": primer_design,28    "GeneClean-BLAST": geneclean_blast,29}30 31if "active_tool" not in st.session_state:32    st.session_state["active_tool"] = list(TOOLS.keys())[0]33 34with st.sidebar:35    st.title("Woloji Genomic Suite v1.0")36    st.caption("Sequence analysis tools for the lab, in one place.")37    st.markdown("---")38    for name in TOOLS:39        is_active = st.session_state["active_tool"] == name40        if st.button(41            name,42            use_container_width=True,43            type="primary" if is_active else "secondary",44            key=f"nav_{name}",45        ):46            st.session_state["active_tool"] = name47    st.markdown("---")48    st.caption(49        "Some tools call external programs (MAFFT, IQ-TREE, BLAST+, Platon, "50        "IntegronFinder). If a step reports the tool as missing, it needs to be "51        "installed in this Space's runtime."52    )53 54TOOLS[st.session_state["active_tool"]].render()